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Identification and Targeting of the Developmental Blockade in Extranodal Natural Killer/T-cell Lymphoma

  • Bethany L. Mundy-Bosse
  • , Christoph Weigel
  • , Yue Zhong Wu
  • , Salma Abdelbaky
  • , Youssef Youssef
  • , Susana Beceiro Casas
  • , Nicholas Polley
  • , Gabrielle Ernst
  • , Karen A. Young
  • , Kathleen K. McConnell
  • , Ansel P. Nalin
  • , Kevin G. Wu
  • , Megan Broughton
  • , Matthew R. Lordo
  • , Ekaterina Altynova
  • , Everardo Hegewisch-Solloa
  • , Daniel Y. Enriquez-Vera
  • , Daniela Dueñas
  • , Carlos Barrionuevo
  • , Shan Chi Yu
  • Atif Saleem, Carlos J. Suarez, Edward L. Briercheck, Hernan Molina-Kirsch, Thomas P. Loughran, Dieter Weichenhan, Christoph Plass, John C. Reneau, Emily M. Mace, Fabiola Valvert Gamboa, David M. Weinstock, Yasodha Natkunam, Michael A. Caligiuri, Anjali Mishra, Pierluigi Porcu, Robert A. Baiocchi, Jonathan E. Brammer, Aharon G. Freud, Christopher C. Oakes

    Research output: Contribution to journalArticlepeer-review

    22 Scopus citations

    Abstract

    Extranodal natural killer/T-cell lymphoma (ENKTL) is an aggressive, rare lymphoma of natural killer (NK) cell origin with poor clinical outcomes. Here we used phenotypic and molecular profiling, including epigenetic analyses, to investigate how ENKTL ontogeny relates to normal NK-cell development. We demonstrate that neoplastic NK cells are stably, but reversibly, arrested at earlier stages of NK-cell maturation. Genes downregulated in the most epigenetic immature tumors were associated with polycomb silencing along with genomic gain and overexpression of EZH2. ENKTL cells exhibited genome-wide DNA hypermethylation. Tumor-specific DNA methylation gains were associated with polycomb-marked regions, involving extensive gene silencing and loss of transcription factor binding. To investigate therapeutic targeting, we treated novel patient-derived xenograft (PDX) models of ENKTL with the DNA hypomethylating agent, 5-azacytidine. Treatment led to reexpression of NK-cell developmental genes, phenotypic NK-cell differentiation, and prolongation of survival. These studies lay the foundation for epigenetic-directed therapy in ENKTL.

    Original languageEnglish
    Pages (from-to)154-169
    Number of pages16
    JournalBlood Cancer Discovery
    Volume3
    Issue number2
    DOIs
    StatePublished - 1 Mar 2022

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